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Cluster: Rep_130_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_130_c_0 Rep_130_c_0_461 570291 570965 - 2.A.76.1.6
TC Rep_130_c_0 Rep_130_c_0_462 571518 573932 - 8.A.3.3.4
CAZyme Rep_130_c_0 Rep_130_c_0_463 574718 575875 - CE9
TC Rep_130_c_0 Rep_130_c_0_464 576135 577484 - 2.A.66.1.25
TC Rep_130_c_0 Rep_130_c_0_465 577558 579960 - 1.B.14.6.7
pfam Rep_130_c_0 Rep_130_c_0_466 580027 581100 - APH | EcKL
pfam Rep_130_c_0 Rep_130_c_0_467 581164 581925 - Methyltrans_RNA | PUA_4
TC Rep_130_c_0 Rep_130_c_0_468 581965 589359 - 9.A.25.1.1
Gene ID: Rep_130_c_0_461
Type: TC
Location: 570291 - 570965 (-)
Gene ID: Rep_130_c_0_462
Type: TC
Location: 571518 - 573932 (-)
Gene ID: Rep_130_c_0_463
Type: CAZyme
Location: 574718 - 575875 (-)
Gene ID: Rep_130_c_0_464
Type: TC
Location: 576135 - 577484 (-)
Gene ID: Rep_130_c_0_465
Type: TC
Location: 577558 - 579960 (-)
Gene ID: Rep_130_c_0_466
Type: pfam
Location: 580027 - 581100 (-)
Gene ID: Rep_130_c_0_467
Type: pfam
Location: 581164 - 581925 (-)
Gene ID: Rep_130_c_0_468
Type: TC
Location: 581965 - 589359 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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