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Cluster: Rep_130_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_130_c_0 Rep_130_c_0_371 452949 454334 - 2.A.6.2.25
TC Rep_130_c_0 Rep_130_c_0_372 454466 457873 - 2.A.6.2.22
TC Rep_130_c_0 Rep_130_c_0_373 458015 459184 - 2.A.6.2.29
TC Rep_130_c_0 Rep_130_c_0_374 459633 462140 + 3.A.9.1.2
pfam Rep_130_c_0 Rep_130_c_0_375 462270 462824 + dTDP_sugar_isom
sulfatase Rep_130_c_0 Rep_130_c_0_376 463017 464798 + S1_97
TC Rep_130_c_0 Rep_130_c_0_377 464943 465695 + 3.A.1.140.1
pfam Rep_130_c_0 Rep_130_c_0_378 465788 467104 + AA_kinase | ACT_9
pfam Rep_130_c_0 Rep_130_c_0_379 467208 468377 + Orn_DAP_Arg_deC | Ala_racemase_N | Orn_Arg_deC_N
CAZyme Rep_130_c_0 Rep_130_c_0_380 468523 471156 - GT35
CAZyme Rep_130_c_0 Rep_130_c_0_381 471295 472980 - GT3
Gene ID: Rep_130_c_0_371
Type: TC
Location: 452949 - 454334 (-)
Gene ID: Rep_130_c_0_372
Type: TC
Location: 454466 - 457873 (-)
Gene ID: Rep_130_c_0_373
Type: TC
Location: 458015 - 459184 (-)
Gene ID: Rep_130_c_0_374
Type: TC
Location: 459633 - 462140 (+)
Gene ID: Rep_130_c_0_375
Type: pfam
Location: 462270 - 462824 (+)
Gene ID: Rep_130_c_0_376
Type: sulfatase
Location: 463017 - 464798 (+)
Gene ID: Rep_130_c_0_377
Type: TC
Location: 464943 - 465695 (+)
Gene ID: Rep_130_c_0_378
Type: pfam
Location: 465788 - 467104 (+)
Gene ID: Rep_130_c_0_379
Type: pfam
Location: 467208 - 468377 (+)
Gene ID: Rep_130_c_0_380
Type: CAZyme
Location: 468523 - 471156 (-)
Gene ID: Rep_130_c_0_381
Type: CAZyme
Location: 471295 - 472980 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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