dbCAN HGM

Cluster: Rep_130_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_130_c_0	Rep_130_c_0_1038	1279036	1280595	-	3.D.4.3.2
pfam	Rep_130_c_0	Rep_130_c_0_1039	1280697	1280972	-	DUF4492
CAZyme	Rep_130_c_0	Rep_130_c_0_1040	1281107	1284640	-	GH95
NULL(UNKNOWN)	Rep_130_c_0	Rep_130_c_0_1041	1284720	1284902	+	NULL(UNKNOWN) [View Structural Homologs]
pfam	Rep_130_c_0	Rep_130_c_0_1042	1284999	1285253	+	Ribosomal_L31
CAZyme	Rep_130_c_0	Rep_130_c_0_1043	1285580	1286779	+	GH109
pfam	Rep_130_c_0	Rep_130_c_0_1044	1286959	1288389	+	GHL10
pfam	Rep_130_c_0	Rep_130_c_0_1045	1288564	1290987	+	AA_kinase \| Homoserine_dh \| NAD_binding_3 \| ACT_7 \| ACT_9 \| ACT_9
TC	Rep_130_c_0	Rep_130_c_0_1046	1291611	1293011	+	2.A.66.1.32

Gene ID: Rep_130_c_0_1038
Type: TC
Location: 1279036 - 1280595 (-)

Gene ID: Rep_130_c_0_1039
Type: pfam
Location: 1280697 - 1280972 (-)

Gene ID: Rep_130_c_0_1040
Type: CAZyme
Location: 1281107 - 1284640 (-)

Gene ID: Rep_130_c_0_1041
Type:
Location: 1284720 - 1284902 (+)

Gene ID: Rep_130_c_0_1042
Type: pfam
Location: 1284999 - 1285253 (+)

Gene ID: Rep_130_c_0_1043
Type: CAZyme
Location: 1285580 - 1286779 (+)

Gene ID: Rep_130_c_0_1044
Type: pfam
Location: 1286959 - 1288389 (+)

Gene ID: Rep_130_c_0_1045
Type: pfam
Location: 1288564 - 1290987 (+)

Gene ID: Rep_130_c_0_1046
Type: TC
Location: 1291611 - 1293011 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.