Cluster: Rep_1289_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1289
- CGC Family ID: CGCFAM_00008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1289_c_18 | Rep_1289_c_18_20 | 21064 | 21840 | + | 3.A.1.103.6 |
| TC | Rep_1289_c_18 | Rep_1289_c_18_21 | 21855 | 22583 | + | 3.A.1.103.1 |
| NULL(UNKNOWN) | Rep_1289_c_18 | Rep_1289_c_18_22 | 22546 | 23754 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1289_c_18 | Rep_1289_c_18_23 | 23744 | 24832 | + | GT4 |
| CAZyme | Rep_1289_c_18 | Rep_1289_c_18_24 | 24847 | 29013 | + | GT4 |
Gene ID: Rep_1289_c_18_20
Type: TC
Location: 21064 - 21840 (+)
Type: TC
Location: 21064 - 21840 (+)
Gene ID: Rep_1289_c_18_21
Type: TC
Location: 21855 - 22583 (+)
Type: TC
Location: 21855 - 22583 (+)
Gene ID: Rep_1289_c_18_22
Type:
Location: 22546 - 23754 (+)
Type:
Location: 22546 - 23754 (+)
Gene ID: Rep_1289_c_18_23
Type: CAZyme
Location: 23744 - 24832 (+)
Type: CAZyme
Location: 23744 - 24832 (+)
Gene ID: Rep_1289_c_18_24
Type: CAZyme
Location: 24847 - 29013 (+)
Type: CAZyme
Location: 24847 - 29013 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Filifactoraceae
Genus
Criibacterium
Species
Criibacterium bergeronii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.