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PROTEIN: Rep_1289_c_18_22

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Protein File & Metadata
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Source:
Rep_1289_c_18_22.pdb
Genome ID:
Rep_1289
Protein ID:
Rep_1289_c_18_22

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Detailed structural information will appear here after analysis...

Protein Sequence 
MLRQFVNTLK   IISIIKKNIK   SLLNLLCFIC   YKRKIISDNK   KNANKILILF   PSPSVPWSYM 60
FQRPQQLAKF   FARAGKTKDV   VVYYGVQNNF   KFTPDKTVKG   TFFLEDNLFL   YNDYSNGKLL 120
ETFNKIVIWR   YWATQKEYLS   NIQKNVQVIN   VYDVVDDVAV   YDYNKKQLSD   HAYLEKKSEI 180
VVTSSKRLKK   LSKREDIFLM   PNACDYDFFA   NPNDNDINLL   DKNLQEKIKG   NKVKVCYYGA 240
IADWFDTDLL   VECAKSYPDW   EFIIIGRLYD   NIGFIDKIFD   YKNIVHFDAI   DYNLLPIILS 300
KINIAIIPFK   INDITKSTSP   VKLFEYLAAG   KPTVTTQLYE   ITDIKTVFIS   STYEEFISNL 360
SKAEIKSKDS   DFIKEMKNIA   KNNSWEKRIE   DFFDFLEEKL   AE 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9HZ80-F1-model_v4 45 402 1 413 0.7538 0.87
AF-Q8DRG8-F1-model_v4 26 402 6 400 0.7506 0.8206
AF-Q7AQE2-F1-model_v4 45 402 1 384 0.7474 0.8363
AF-A0A1A7SPW8-F1-model_v4 44 402 4 378 0.7393 0.8179
AF-Q9HTC0-F1-model_v4 46 402 1 370 0.7384 0.8248
AF-Q59002-F1-model_v4 45 402 1 387 0.736 0.828
AF-X8F781-F1-model_v4 44 402 1 384 0.7355 0.8235
AF-Q2G255-F1-model_v4 45 402 1 373 0.7347 0.8155
AF-Q2G1J7-F1-model_v4 43 397 1 401 0.733 0.842
AF-A0A0H3GSJ8-F1-model_v4 43 402 1 354 0.7317 0.7946
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F4A1Q0-F1-model_v4 GT4 45 402 1 337 0.8431 0.9289
AF-D1YV36-F1-model_v4 GT4 17 400 20 396 0.8369 0.8972
AF-E8N205-F1-model_v4 GT4 24 402 33 397 0.8334 0.9222
AF-B9M566-F1-model_v4 GT4 2 402 2 432 0.8309 0.8792
AF-D9TNJ4-F1-model_v4 GT4 45 401 1 334 0.8303 0.9191
AF-A0A2U8DW44-F1-model_v4 GT4 45 402 1 330 0.8291 0.9235
AF-A0A0E3JRP8-F1-model_v4 GT4 45 402 1 330 0.8271 0.9215
AF-I0BH97-F1-model_v4 GT4 45 400 1 332 0.8211 0.91
AF-G7W530-F1-model_v4 GT4 45 402 1 331 0.8206 0.9168
AF-A0A3Q9RJW2-F1-model_v4 GT4 45 402 1 335 0.8171 0.9041
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QTH42333.1 GT4 34 402 1 367 0.8887 0.9398
WCF07872.1 GT4 17 401 28 412 0.856 0.9151
F4A1Q0 GT4 45 402 1 337 0.8431 0.9289
A0A6P1MCE9 GT4 45 402 1 339 0.8407 0.9288
D1YV36 GT4 17 400 20 396 0.8369 0.8972
E8N205 GT4 24 402 33 397 0.8334 0.9222
A0A975AWT9 GT4 45 402 1 337 0.831 0.9223
B9M566 GT4 2 402 2 432 0.8309 0.8792
A0A2X2YD50 GT4 24 399 24 411 0.8306 0.9076
A0A2U8DW44 GT4 45 402 1 330 0.8291 0.9235
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6n1x-assembly1.cif.gz_A 44 402 3 377 0.7423 0.8191
3mbo-assembly1.cif.gz_A 44 402 1 371 0.7405 0.8123
3mbo-assembly2.cif.gz_C 45 402 1 372 0.7402 0.8152
3mbo-assembly1.cif.gz_B 44 402 1 368 0.7377 0.806
3oka-assembly1.cif.gz_A 44 402 1 378 0.73 0.8104
4xsu-assembly1.cif.gz_B 45 400 1 367 0.7255 0.7988
3c4q-assembly2.cif.gz_B 45 402 1 392 0.7243 0.8186
7mi0-assembly1.cif.gz_A 43 402 1 378 0.7242 0.801
4xsu-assembly1.cif.gz_A 45 400 1 368 0.723 0.7966
3c4q-assembly1.cif.gz_A 45 402 1 392 0.7215 0.8158
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O32267-F1-model_v4 42 401 3 396 0.7644 0.8589
AF-Q4JAK2-F1-model_v4 44 400 1 352 0.7453 0.813
AF-Q93P60-F1-model_v4 45 402 1 390 0.7383 0.837
AF-Q9R9N0-F1-model_v4 45 402 1 342 0.7355 0.8117
AF-Q9R9N2-F1-model_v4 35 401 1 351 0.7353 0.8012
AF-Q81ST7-F1-model_v4 44 402 1 375 0.7326 0.8129
AF-P9WMZ2-F1-model_v4 44 402 1 384 0.7309 0.8186
AF-O07147-F1-model_v4 45 402 1 366 0.726 0.8006
AF-P9WMY5-F1-model_v4 43 402 2 372 0.7249 0.8011
AF-P9WMZ3-F1-model_v4 44 402 1 384 0.7246 0.8123
Download Full SwissProt Results