Cluster: Rep_127_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_127
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_127_c_1 | Rep_127_c_1_132 | 166326 | 167711 | - | GH57 |
| CAZyme | Rep_127_c_1 | Rep_127_c_1_133 | 167756 | 169030 | - | GT4 |
| CAZyme | Rep_127_c_1 | Rep_127_c_1_134 | 169114 | 171072 | - | GH133 |
| TF | Rep_127_c_1 | Rep_127_c_1_135 | 171545 | 172282 | + | 0038753 |
| STP | Rep_127_c_1 | Rep_127_c_1_136 | 173358 | 174326 | - | Glucokinase |
| TC | Rep_127_c_1 | Rep_127_c_1_137 | 174443 | 174943 | - | 1.A.22.1.1 |
Gene ID: Rep_127_c_1_132
Type: CAZyme
Location: 166326 - 167711 (-)
Type: CAZyme
Location: 166326 - 167711 (-)
Gene ID: Rep_127_c_1_133
Type: CAZyme
Location: 167756 - 169030 (-)
Type: CAZyme
Location: 167756 - 169030 (-)
Gene ID: Rep_127_c_1_134
Type: CAZyme
Location: 169114 - 171072 (-)
Type: CAZyme
Location: 169114 - 171072 (-)
Gene ID: Rep_127_c_1_135
Type: TF
Location: 171545 - 172282 (+)
Type: TF
Location: 171545 - 172282 (+)
Gene ID: Rep_127_c_1_136
Type: STP
Location: 173358 - 174326 (-)
Type: STP
Location: 173358 - 174326 (-)
Gene ID: Rep_127_c_1_137
Type: TC
Location: 174443 - 174943 (-)
Type: TC
Location: 174443 - 174943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Alloprevotella
Species
Alloprevotella sp000437675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.