Cluster: Rep_1259_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1259
- CGC Family ID: CGCFAM_08763
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1259_c_3 | Rep_1259_c_3_66 | 61337 | 61762 | + | 4.A.6.1.7 |
| pfam | Rep_1259_c_3 | Rep_1259_c_3_67 | 61796 | 62287 | + | PTSIIB_sorb |
| pfam | Rep_1259_c_3 | Rep_1259_c_3_68 | 62331 | 63170 | + | EII-Sor |
| TC | Rep_1259_c_3 | Rep_1259_c_3_69 | 63173 | 64015 | + | 4.A.6.1.17 |
| NULL(UNKNOWN) | Rep_1259_c_3 | Rep_1259_c_3_70 | 64095 | 64403 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1259_c_3 | Rep_1259_c_3_71 | 64446 | 65405 | - | GT14 |
Gene ID: Rep_1259_c_3_66
Type: TC
Location: 61337 - 61762 (+)
Type: TC
Location: 61337 - 61762 (+)
Gene ID: Rep_1259_c_3_67
Type: pfam
Location: 61796 - 62287 (+)
Type: pfam
Location: 61796 - 62287 (+)
Gene ID: Rep_1259_c_3_68
Type: pfam
Location: 62331 - 63170 (+)
Type: pfam
Location: 62331 - 63170 (+)
Gene ID: Rep_1259_c_3_69
Type: TC
Location: 63173 - 64015 (+)
Type: TC
Location: 63173 - 64015 (+)
Gene ID: Rep_1259_c_3_70
Type:
Location: 64095 - 64403 (+)
Type:
Location: 64095 - 64403 (+)
Gene ID: Rep_1259_c_3_71
Type: CAZyme
Location: 64446 - 65405 (-)
Type: CAZyme
Location: 64446 - 65405 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.