Cluster: Rep_1259_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1259
- CGC Family ID: CGCFAM_08764
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1259_c_1 | Rep_1259_c_1_47 | 51060 | 52418 | + | 2.A.38.1.1 |
| TC | Rep_1259_c_1 | Rep_1259_c_1_48 | 52405 | 53910 | + | 2.A.38.1.6 |
| pfam | Rep_1259_c_1 | Rep_1259_c_1_49 | 53994 | 54692 | + | Metallophos | Metallophos_2 |
| TF | Rep_1259_c_1 | Rep_1259_c_1_50 | 54749 | 55030 | + | HTH_3 |
| CAZyme | Rep_1259_c_1 | Rep_1259_c_1_51 | 55057 | 56469 | - | GH73 |
Gene ID: Rep_1259_c_1_47
Type: TC
Location: 51060 - 52418 (+)
Type: TC
Location: 51060 - 52418 (+)
Gene ID: Rep_1259_c_1_48
Type: TC
Location: 52405 - 53910 (+)
Type: TC
Location: 52405 - 53910 (+)
Gene ID: Rep_1259_c_1_49
Type: pfam
Location: 53994 - 54692 (+)
Type: pfam
Location: 53994 - 54692 (+)
Gene ID: Rep_1259_c_1_50
Type: TF
Location: 54749 - 55030 (+)
Type: TF
Location: 54749 - 55030 (+)
Gene ID: Rep_1259_c_1_51
Type: CAZyme
Location: 55057 - 56469 (-)
Type: CAZyme
Location: 55057 - 56469 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.