Cluster: Rep_1259_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1259
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1259_c_12 | Rep_1259_c_12_2 | 171 | 1040 | - | 1.A.78.2.2 |
| pfam | Rep_1259_c_12 | Rep_1259_c_12_3 | 1037 | 1882 | - | Pirin | Pirin_C |
| TF | Rep_1259_c_12 | Rep_1259_c_12_4 | 1885 | 2301 | - | MarR |
| CAZyme | Rep_1259_c_12 | Rep_1259_c_12_5 | 2436 | 3617 | - | GT4 |
| CAZyme | Rep_1259_c_12 | Rep_1259_c_12_6 | 3658 | 4581 | - | GT2 |
Gene ID: Rep_1259_c_12_2
Type: TC
Location: 171 - 1040 (-)
Type: TC
Location: 171 - 1040 (-)
Gene ID: Rep_1259_c_12_3
Type: pfam
Location: 1037 - 1882 (-)
Type: pfam
Location: 1037 - 1882 (-)
Gene ID: Rep_1259_c_12_4
Type: TF
Location: 1885 - 2301 (-)
Type: TF
Location: 1885 - 2301 (-)
Gene ID: Rep_1259_c_12_5
Type: CAZyme
Location: 2436 - 3617 (-)
Type: CAZyme
Location: 2436 - 3617 (-)
Gene ID: Rep_1259_c_12_6
Type: CAZyme
Location: 3658 - 4581 (-)
Type: CAZyme
Location: 3658 - 4581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.