Cluster: Rep_1259_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: Rep_1259
- CGC Family ID: CGCFAM_00042
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1259_c_4 | Rep_1259_c_4_54 | 57106 | 58518 | + | GH1 |
| pfam | Rep_1259_c_4 | Rep_1259_c_4_55 | 58515 | 58808 | + | PTS_IIB |
| TC | Rep_1259_c_4 | Rep_1259_c_4_56 | 58813 | 60099 | + | 4.A.3.2.6 |
Gene ID: Rep_1259_c_4_54
Type: CAZyme
Location: 57106 - 58518 (+)
Type: CAZyme
Location: 57106 - 58518 (+)
Gene ID: Rep_1259_c_4_55
Type: pfam
Location: 58515 - 58808 (+)
Type: pfam
Location: 58515 - 58808 (+)
Gene ID: Rep_1259_c_4_56
Type: TC
Location: 58813 - 60099 (+)
Type: TC
Location: 58813 - 60099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.