Cluster: Rep_1259_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1259
- CGC Family ID: CGCFAM_00416
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1259_c_3 | Rep_1259_c_3_106 | 103968 | 105335 | + | 9.B.18.1.3 |
| pfam | Rep_1259_c_3 | Rep_1259_c_3_107 | 105360 | 105827 | + | Alg14 |
| pfam | Rep_1259_c_3 | Rep_1259_c_3_108 | 105840 | 106346 | + | Glyco_tran_28_C |
| CAZyme | Rep_1259_c_3 | Rep_1259_c_3_109 | 106350 | 107084 | + | GT32 |
| CAZyme | Rep_1259_c_3 | Rep_1259_c_3_110 | 107081 | 108031 | + | GT2 |
| NULL(UNKNOWN) | Rep_1259_c_3 | Rep_1259_c_3_111 | 108028 | 109323 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1259_c_3 | Rep_1259_c_3_112 | 109313 | 110116 | + | GT32 |
Gene ID: Rep_1259_c_3_106
Type: TC
Location: 103968 - 105335 (+)
Type: TC
Location: 103968 - 105335 (+)
Gene ID: Rep_1259_c_3_107
Type: pfam
Location: 105360 - 105827 (+)
Type: pfam
Location: 105360 - 105827 (+)
Gene ID: Rep_1259_c_3_108
Type: pfam
Location: 105840 - 106346 (+)
Type: pfam
Location: 105840 - 106346 (+)
Gene ID: Rep_1259_c_3_109
Type: CAZyme
Location: 106350 - 107084 (+)
Type: CAZyme
Location: 106350 - 107084 (+)
Gene ID: Rep_1259_c_3_110
Type: CAZyme
Location: 107081 - 108031 (+)
Type: CAZyme
Location: 107081 - 108031 (+)
Gene ID: Rep_1259_c_3_111
Type:
Location: 108028 - 109323 (+)
Type:
Location: 108028 - 109323 (+)
Gene ID: Rep_1259_c_3_112
Type: CAZyme
Location: 109313 - 110116 (+)
Type: CAZyme
Location: 109313 - 110116 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Faecalicoccus
Species
Faecalicoccus sp900546545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.