Cluster: Rep_111_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_111_c_111 | Rep_111_c_111_1 | 1046 | 2215 | - | GT4 |
| pfam | Rep_111_c_111 | Rep_111_c_111_2 | 2248 | 3306 | - | LPG_synthase_TM |
| TC | Rep_111_c_111 | Rep_111_c_111_3 | 3574 | 5976 | + | 1.B.14.6.5 |
Gene ID: Rep_111_c_111_1
Type: CAZyme
Location: 1046 - 2215 (-)
Type: CAZyme
Location: 1046 - 2215 (-)
Gene ID: Rep_111_c_111_2
Type: pfam
Location: 2248 - 3306 (-)
Type: pfam
Location: 2248 - 3306 (-)
Gene ID: Rep_111_c_111_3
Type: TC
Location: 3574 - 5976 (+)
Type: TC
Location: 3574 - 5976 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.