Cluster: Rep_111_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_111_c_92 | Rep_111_c_92_6 | 4804 | 5808 | - | GH130_2 |
| pfam | Rep_111_c_92 | Rep_111_c_92_7 | 5809 | 7095 | - | BT1 | MFS_1 |
| TC | Rep_111_c_92 | Rep_111_c_92_8 | 7097 | 8545 | - | 2.A.103.1.2 |
Gene ID: Rep_111_c_92_6
Type: CAZyme
Location: 4804 - 5808 (-)
Type: CAZyme
Location: 4804 - 5808 (-)
Gene ID: Rep_111_c_92_7
Type: pfam
Location: 5809 - 7095 (-)
Type: pfam
Location: 5809 - 7095 (-)
Gene ID: Rep_111_c_92_8
Type: TC
Location: 7097 - 8545 (-)
Type: TC
Location: 7097 - 8545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.