Cluster: Rep_111_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- CGC Family ID: CGCFAM_01114
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_111_c_64 | Rep_111_c_64_4 | 2375 | 4783 | - | GH20 |
| STP | Rep_111_c_64 | Rep_111_c_64_5 | 4819 | 6111 | - | Aminotran_1_2 |
| TC | Rep_111_c_64 | Rep_111_c_64_6 | 6791 | 7552 | - | 3.D.10.1.5 |
| TC | Rep_111_c_64 | Rep_111_c_64_7 | 7578 | 8177 | - | 3.D.10.1.5 |
Gene ID: Rep_111_c_64_4
Type: CAZyme
Location: 2375 - 4783 (-)
Type: CAZyme
Location: 2375 - 4783 (-)
Gene ID: Rep_111_c_64_5
Type: STP
Location: 4819 - 6111 (-)
Type: STP
Location: 4819 - 6111 (-)
Gene ID: Rep_111_c_64_6
Type: TC
Location: 6791 - 7552 (-)
Type: TC
Location: 6791 - 7552 (-)
Gene ID: Rep_111_c_64_7
Type: TC
Location: 7578 - 8177 (-)
Type: TC
Location: 7578 - 8177 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.