Cluster: Rep_111_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_111_c_225 | Rep_111_c_225_1 | 3 | 1367 | + | GH13_46 |
| peptidase | Rep_111_c_225 | Rep_111_c_225_2 | 1579 | 3057 | + | M20.UPC |
| pfam | Rep_111_c_225 | Rep_111_c_225_3 | 3070 | 4164 | + | Exo_endo_phos_3 |
| TC | Rep_111_c_225 | Rep_111_c_225_4 | 4471 | 5973 | + | 2.A.36.6.11 |
Gene ID: Rep_111_c_225_1
Type: CAZyme
Location: 3 - 1367 (+)
Type: CAZyme
Location: 3 - 1367 (+)
Gene ID: Rep_111_c_225_2
Type: peptidase
Location: 1579 - 3057 (+)
Type: peptidase
Location: 1579 - 3057 (+)
Gene ID: Rep_111_c_225_3
Type: pfam
Location: 3070 - 4164 (+)
Type: pfam
Location: 3070 - 4164 (+)
Gene ID: Rep_111_c_225_4
Type: TC
Location: 4471 - 5973 (+)
Type: TC
Location: 4471 - 5973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.