Cluster: Rep_111_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_111
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_111_c_218 | Rep_111_c_218_5 | 3822 | 4478 | - | 9.B.18.1.3 |
| pfam | Rep_111_c_218 | Rep_111_c_218_6 | 5038 | 5775 | - | 8xMP |
| CAZyme | Rep_111_c_218 | Rep_111_c_218_7 | 5796 | 6953 | - | GT4 |
| NULL(UNKNOWN) | Rep_111_c_218 | Rep_111_c_218_8 | 6954 | 8237 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_111_c_218 | Rep_111_c_218_9 | 8269 | 9255 | - | GT2 |
Gene ID: Rep_111_c_218_5
Type: TC
Location: 3822 - 4478 (-)
Type: TC
Location: 3822 - 4478 (-)
Gene ID: Rep_111_c_218_6
Type: pfam
Location: 5038 - 5775 (-)
Type: pfam
Location: 5038 - 5775 (-)
Gene ID: Rep_111_c_218_7
Type: CAZyme
Location: 5796 - 6953 (-)
Type: CAZyme
Location: 5796 - 6953 (-)
Gene ID: Rep_111_c_218_8
Type:
Location: 6954 - 8237 (-)
Type:
Location: 6954 - 8237 (-)
Gene ID: Rep_111_c_218_9
Type: CAZyme
Location: 8269 - 9255 (-)
Type: CAZyme
Location: 8269 - 9255 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.