Cluster: Rep_111_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- CGC Family ID: CGCFAM_06314
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_111_c_191 | Rep_111_c_191_4 | 2458 | 3066 | + | 2.A.51.1.6 |
| TC | Rep_111_c_191 | Rep_111_c_191_5 | 3063 | 3593 | + | 2.A.51.1.6 |
| pfam | Rep_111_c_191 | Rep_111_c_191_6 | 3648 | 4130 | - | DMRL_synthase |
| pfam | Rep_111_c_191 | Rep_111_c_191_7 | 4154 | 5407 | - | FtsX |
| CAZyme | Rep_111_c_191 | Rep_111_c_191_8 | 5411 | 7651 | - | GH92 |
Gene ID: Rep_111_c_191_4
Type: TC
Location: 2458 - 3066 (+)
Type: TC
Location: 2458 - 3066 (+)
Gene ID: Rep_111_c_191_5
Type: TC
Location: 3063 - 3593 (+)
Type: TC
Location: 3063 - 3593 (+)
Gene ID: Rep_111_c_191_6
Type: pfam
Location: 3648 - 4130 (-)
Type: pfam
Location: 3648 - 4130 (-)
Gene ID: Rep_111_c_191_7
Type: pfam
Location: 4154 - 5407 (-)
Type: pfam
Location: 4154 - 5407 (-)
Gene ID: Rep_111_c_191_8
Type: CAZyme
Location: 5411 - 7651 (-)
Type: CAZyme
Location: 5411 - 7651 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.