Cluster: Rep_111_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_111
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_111_c_187 | Rep_111_c_187_1 | 1 | 1056 | + | GH95 |
| NULL(UNKNOWN) | Rep_111_c_187 | Rep_111_c_187_2 | 1182 | 1967 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_111_c_187 | Rep_111_c_187_3 | 1982 | 11089 | + | 2.A.16.2.2 |
| pfam | Rep_111_c_187 | Rep_111_c_187_4 | 11103 | 12989 | + | Viral_helicase1 | AAA_19 | UvrD_C | UvrD_C_2 | AAA_30 |
| pfam | Rep_111_c_187 | Rep_111_c_187_5 | 13323 | 14243 | + | DHDPS |
| TC | Rep_111_c_187 | Rep_111_c_187_6 | 14323 | 15336 | + | 2.A.1.10.2 |
Gene ID: Rep_111_c_187_1
Type: CAZyme
Location: 1 - 1056 (+)
Type: CAZyme
Location: 1 - 1056 (+)
Gene ID: Rep_111_c_187_2
Type:
Location: 1182 - 1967 (+)
Type:
Location: 1182 - 1967 (+)
Gene ID: Rep_111_c_187_3
Type: TC
Location: 1982 - 11089 (+)
Type: TC
Location: 1982 - 11089 (+)
Gene ID: Rep_111_c_187_4
Type: pfam
Location: 11103 - 12989 (+)
Type: pfam
Location: 11103 - 12989 (+)
Gene ID: Rep_111_c_187_5
Type: pfam
Location: 13323 - 14243 (+)
Type: pfam
Location: 13323 - 14243 (+)
Gene ID: Rep_111_c_187_6
Type: TC
Location: 14323 - 15336 (+)
Type: TC
Location: 14323 - 15336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.