Cluster: Rep_111_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_111
- CGC Family ID: CGCFAM_01208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_111_c_8 | Rep_111_c_8_3 | 1299 | 3500 | - | 2.A.16.2.2 |
| CAZyme | Rep_111_c_8 | Rep_111_c_8_4 | 3953 | 5191 | + | GH171 |
| CAZyme | Rep_111_c_8 | Rep_111_c_8_5 | 5198 | 6904 | + | GH3 |
Gene ID: Rep_111_c_8_3
Type: TC
Location: 1299 - 3500 (-)
Type: TC
Location: 1299 - 3500 (-)
Gene ID: Rep_111_c_8_4
Type: CAZyme
Location: 3953 - 5191 (+)
Type: CAZyme
Location: 3953 - 5191 (+)
Gene ID: Rep_111_c_8_5
Type: CAZyme
Location: 5198 - 6904 (+)
Type: CAZyme
Location: 5198 - 6904 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.