dbCAN Logo

Cluster: Rep_109_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_109_c_70 Rep_109_c_70_4 4300 5229 + 3.A.1.105.15
TC Rep_109_c_70 Rep_109_c_70_5 5232 6188 + 3.A.1.105.15
TC Rep_109_c_70 Rep_109_c_70_6 6181 6918 + 3.A.1.105.15
TC Rep_109_c_70 Rep_109_c_70_7 6951 8048 + 3.A.1.105.16
TC Rep_109_c_70 Rep_109_c_70_8 8045 9166 + 3.A.1.105.4
STP Rep_109_c_70 Rep_109_c_70_9 9276 10754 + HD
pfam Rep_109_c_70 Rep_109_c_70_10 10762 11205 + dCMP_cyt_deam_1 | MafB19-deam
CAZyme Rep_109_c_70 Rep_109_c_70_11 11743 15726 + CBM32 | GH2
Gene ID: Rep_109_c_70_4
Type: TC
Location: 4300 - 5229 (+)
Gene ID: Rep_109_c_70_5
Type: TC
Location: 5232 - 6188 (+)
Gene ID: Rep_109_c_70_6
Type: TC
Location: 6181 - 6918 (+)
Gene ID: Rep_109_c_70_7
Type: TC
Location: 6951 - 8048 (+)
Gene ID: Rep_109_c_70_8
Type: TC
Location: 8045 - 9166 (+)
Gene ID: Rep_109_c_70_9
Type: STP
Location: 9276 - 10754 (+)
Gene ID: Rep_109_c_70_10
Type: pfam
Location: 10762 - 11205 (+)
Gene ID: Rep_109_c_70_11
Type: CAZyme
Location: 11743 - 15726 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List