Cluster: Rep_109_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_109_c_19 | Rep_109_c_19_13 | 10986 | 11516 | - | 8.A.58.2.9 |
| CAZyme | Rep_109_c_19 | Rep_109_c_19_14 | 11701 | 13131 | + | GH109 |
| TC | Rep_109_c_19 | Rep_109_c_19_15 | 13425 | 15209 | - | 3.A.16.1.2 |
| TC | Rep_109_c_19 | Rep_109_c_19_16 | 15227 | 17761 | - | 3.A.9.1.1 |
Gene ID: Rep_109_c_19_13
Type: TC
Location: 10986 - 11516 (-)
Type: TC
Location: 10986 - 11516 (-)
Gene ID: Rep_109_c_19_14
Type: CAZyme
Location: 11701 - 13131 (+)
Type: CAZyme
Location: 11701 - 13131 (+)
Gene ID: Rep_109_c_19_15
Type: TC
Location: 13425 - 15209 (-)
Type: TC
Location: 13425 - 15209 (-)
Gene ID: Rep_109_c_19_16
Type: TC
Location: 15227 - 17761 (-)
Type: TC
Location: 15227 - 17761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.