Cluster: Rep_109_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_109_c_166 | Rep_109_c_166_3 | 2236 | 5298 | + | 1.B.14.6.13 |
| TC | Rep_109_c_166 | Rep_109_c_166_4 | 5318 | 6880 | + | 8.A.46.2.1 |
| NULL(UNKNOWN) | Rep_109_c_166 | Rep_109_c_166_5 | 6905 | 7960 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_109_c_166 | Rep_109_c_166_6 | 7971 | 9188 | + | BT_3987-like_N | Laminin_G_3 |
| CAZyme | Rep_109_c_166 | Rep_109_c_166_7 | 9214 | 10629 | + | GH18 |
Gene ID: Rep_109_c_166_3
Type: TC
Location: 2236 - 5298 (+)
Type: TC
Location: 2236 - 5298 (+)
Gene ID: Rep_109_c_166_4
Type: TC
Location: 5318 - 6880 (+)
Type: TC
Location: 5318 - 6880 (+)
Gene ID: Rep_109_c_166_5
Type:
Location: 6905 - 7960 (+)
Type:
Location: 6905 - 7960 (+)
Gene ID: Rep_109_c_166_6
Type: pfam
Location: 7971 - 9188 (+)
Type: pfam
Location: 7971 - 9188 (+)
Gene ID: Rep_109_c_166_7
Type: CAZyme
Location: 9214 - 10629 (+)
Type: CAZyme
Location: 9214 - 10629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.