Cluster: Rep_109_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_109_c_163 | Rep_109_c_163_9 | 12875 | 14704 | - | 2.A.47.4.8 |
| STP | Rep_109_c_163 | Rep_109_c_163_10 | 14880 | 16064 | - | Aminotran_1_2 |
| TC | Rep_109_c_163 | Rep_109_c_163_11 | 16715 | 19876 | + | 1.B.14.6.13 |
| TC | Rep_109_c_163 | Rep_109_c_163_12 | 19893 | 21545 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | Rep_109_c_163 | Rep_109_c_163_13 | 21647 | 22573 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_109_c_163 | Rep_109_c_163_14 | 22570 | 25509 | + | GH92 |
Gene ID: Rep_109_c_163_9
Type: TC
Location: 12875 - 14704 (-)
Type: TC
Location: 12875 - 14704 (-)
Gene ID: Rep_109_c_163_10
Type: STP
Location: 14880 - 16064 (-)
Type: STP
Location: 14880 - 16064 (-)
Gene ID: Rep_109_c_163_11
Type: TC
Location: 16715 - 19876 (+)
Type: TC
Location: 16715 - 19876 (+)
Gene ID: Rep_109_c_163_12
Type: TC
Location: 19893 - 21545 (+)
Type: TC
Location: 19893 - 21545 (+)
Gene ID: Rep_109_c_163_13
Type:
Location: 21647 - 22573 (+)
Type:
Location: 21647 - 22573 (+)
Gene ID: Rep_109_c_163_14
Type: CAZyme
Location: 22570 - 25509 (+)
Type: CAZyme
Location: 22570 - 25509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.