Cluster: Rep_109_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_109_c_154 | Rep_109_c_154_1 | 431 | 1159 | + | 3.D.10.1.2 |
| TC | Rep_109_c_154 | Rep_109_c_154_2 | 1217 | 3169 | + | 3.D.10.1.5 |
| TC | Rep_109_c_154 | Rep_109_c_154_3 | 3192 | 3953 | + | 3.D.10.1.5 |
| STP | Rep_109_c_154 | Rep_109_c_154_4 | 4215 | 5507 | + | Aminotran_1_2 |
| CAZyme | Rep_109_c_154 | Rep_109_c_154_5 | 5543 | 7951 | + | GH20 |
Gene ID: Rep_109_c_154_1
Type: TC
Location: 431 - 1159 (+)
Type: TC
Location: 431 - 1159 (+)
Gene ID: Rep_109_c_154_2
Type: TC
Location: 1217 - 3169 (+)
Type: TC
Location: 1217 - 3169 (+)
Gene ID: Rep_109_c_154_3
Type: TC
Location: 3192 - 3953 (+)
Type: TC
Location: 3192 - 3953 (+)
Gene ID: Rep_109_c_154_4
Type: STP
Location: 4215 - 5507 (+)
Type: STP
Location: 4215 - 5507 (+)
Gene ID: Rep_109_c_154_5
Type: CAZyme
Location: 5543 - 7951 (+)
Type: CAZyme
Location: 5543 - 7951 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.