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Cluster: Rep_109_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_109_c_151 Rep_109_c_151_1 563 2758 + 8.A.51.1.1
pfam Rep_109_c_151 Rep_109_c_151_2 2755 3678 + Radical_SAM
pfam Rep_109_c_151 Rep_109_c_151_3 3695 4846 + Lactonase
TC Rep_109_c_151 Rep_109_c_151_4 4853 5461 + 2.A.51.1.6
TC Rep_109_c_151 Rep_109_c_151_5 5458 5988 + 2.A.51.1.6
pfam Rep_109_c_151 Rep_109_c_151_6 6378 6860 - DMRL_synthase
pfam Rep_109_c_151 Rep_109_c_151_7 6882 8135 - FtsX | MacB_PCD
CAZyme Rep_109_c_151 Rep_109_c_151_8 8139 10379 - GH92
Gene ID: Rep_109_c_151_1
Type: TC
Location: 563 - 2758 (+)
Gene ID: Rep_109_c_151_2
Type: pfam
Location: 2755 - 3678 (+)
Gene ID: Rep_109_c_151_3
Type: pfam
Location: 3695 - 4846 (+)
Gene ID: Rep_109_c_151_4
Type: TC
Location: 4853 - 5461 (+)
Gene ID: Rep_109_c_151_5
Type: TC
Location: 5458 - 5988 (+)
Gene ID: Rep_109_c_151_6
Type: pfam
Location: 6378 - 6860 (-)
Gene ID: Rep_109_c_151_7
Type: pfam
Location: 6882 - 8135 (-)
Gene ID: Rep_109_c_151_8
Type: CAZyme
Location: 8139 - 10379 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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