Cluster: Rep_109_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_109
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_109_c_146 | Rep_109_c_146_1 | 83 | 2191 | - | CE20 |
| pfam | Rep_109_c_146 | Rep_109_c_146_2 | 2251 | 3585 | - | UPF0004 | TRAM | Radical_SAM |
| NULL(UNKNOWN) | Rep_109_c_146 | Rep_109_c_146_3 | 3745 | 4224 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_109_c_146 | Rep_109_c_146_4 | 4433 | 5644 | + | 1.B.6.1.6 |
| CAZyme | Rep_109_c_146 | Rep_109_c_146_5 | 5837 | 7522 | + | GH13_38 |
Gene ID: Rep_109_c_146_1
Type: CAZyme
Location: 83 - 2191 (-)
Type: CAZyme
Location: 83 - 2191 (-)
Gene ID: Rep_109_c_146_2
Type: pfam
Location: 2251 - 3585 (-)
Type: pfam
Location: 2251 - 3585 (-)
Gene ID: Rep_109_c_146_3
Type:
Location: 3745 - 4224 (+)
Type:
Location: 3745 - 4224 (+)
Gene ID: Rep_109_c_146_4
Type: TC
Location: 4433 - 5644 (+)
Type: TC
Location: 4433 - 5644 (+)
Gene ID: Rep_109_c_146_5
Type: CAZyme
Location: 5837 - 7522 (+)
Type: CAZyme
Location: 5837 - 7522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.