Cluster: Rep_108_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_108_c_4 | Rep_108_c_4_40 | 51114 | 51842 | + | 3.D.10.1.2 |
| TC | Rep_108_c_4 | Rep_108_c_4_41 | 51900 | 53852 | + | 3.D.10.1.5 |
| TC | Rep_108_c_4 | Rep_108_c_4_42 | 53875 | 54636 | + | 3.D.10.1.5 |
| STP | Rep_108_c_4 | Rep_108_c_4_43 | 55016 | 56308 | + | Aminotran_1_2 |
| CAZyme | Rep_108_c_4 | Rep_108_c_4_44 | 56344 | 58752 | + | GH20 |
Gene ID: Rep_108_c_4_40
Type: TC
Location: 51114 - 51842 (+)
Type: TC
Location: 51114 - 51842 (+)
Gene ID: Rep_108_c_4_41
Type: TC
Location: 51900 - 53852 (+)
Type: TC
Location: 51900 - 53852 (+)
Gene ID: Rep_108_c_4_42
Type: TC
Location: 53875 - 54636 (+)
Type: TC
Location: 53875 - 54636 (+)
Gene ID: Rep_108_c_4_43
Type: STP
Location: 55016 - 56308 (+)
Type: STP
Location: 55016 - 56308 (+)
Gene ID: Rep_108_c_4_44
Type: CAZyme
Location: 56344 - 58752 (+)
Type: CAZyme
Location: 56344 - 58752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.