Cluster: Rep_108_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_108_c_4 | Rep_108_c_4_11 | 16494 | 17972 | + | 2.A.103.1.2 |
| pfam | Rep_108_c_4 | Rep_108_c_4_12 | 17976 | 19262 | + | BT1 | MFS_1 |
| CAZyme | Rep_108_c_4 | Rep_108_c_4_13 | 19263 | 20267 | + | GH130_2 |
Gene ID: Rep_108_c_4_11
Type: TC
Location: 16494 - 17972 (+)
Type: TC
Location: 16494 - 17972 (+)
Gene ID: Rep_108_c_4_12
Type: pfam
Location: 17976 - 19262 (+)
Type: pfam
Location: 17976 - 19262 (+)
Gene ID: Rep_108_c_4_13
Type: CAZyme
Location: 19263 - 20267 (+)
Type: CAZyme
Location: 19263 - 20267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.