Cluster: Rep_108_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_108_c_3 | Rep_108_c_3_55 | 75376 | 76380 | - | GH73 |
| pfam | Rep_108_c_3 | Rep_108_c_3_56 | 76387 | 77130 | - | 2-ph_phosp |
| TC | Rep_108_c_3 | Rep_108_c_3_57 | 77109 | 77861 | - | 9.B.158.1.1 |
| CAZyme | Rep_108_c_3 | Rep_108_c_3_58 | 77854 | 80343 | - | GH2 |
| pfam | Rep_108_c_3 | Rep_108_c_3_59 | 80421 | 82172 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| TC | Rep_108_c_3 | Rep_108_c_3_60 | 82194 | 83453 | - | 9.A.40.2.4 |
Gene ID: Rep_108_c_3_55
Type: CAZyme
Location: 75376 - 76380 (-)
Type: CAZyme
Location: 75376 - 76380 (-)
Gene ID: Rep_108_c_3_56
Type: pfam
Location: 76387 - 77130 (-)
Type: pfam
Location: 76387 - 77130 (-)
Gene ID: Rep_108_c_3_57
Type: TC
Location: 77109 - 77861 (-)
Type: TC
Location: 77109 - 77861 (-)
Gene ID: Rep_108_c_3_58
Type: CAZyme
Location: 77854 - 80343 (-)
Type: CAZyme
Location: 77854 - 80343 (-)
Gene ID: Rep_108_c_3_59
Type: pfam
Location: 80421 - 82172 (-)
Type: pfam
Location: 80421 - 82172 (-)
Gene ID: Rep_108_c_3_60
Type: TC
Location: 82194 - 83453 (-)
Type: TC
Location: 82194 - 83453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.