Cluster: Rep_108_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_108_c_0 | Rep_108_c_0_91 | 115222 | 116643 | + | 2.A.1.1.55 |
| CAZyme | Rep_108_c_0 | Rep_108_c_0_92 | 116657 | 118942 | + | GH20 |
| TC | Rep_108_c_0 | Rep_108_c_0_93 | 119010 | 122141 | + | 1.B.14.6.1 |
Gene ID: Rep_108_c_0_91
Type: TC
Location: 115222 - 116643 (+)
Type: TC
Location: 115222 - 116643 (+)
Gene ID: Rep_108_c_0_92
Type: CAZyme
Location: 116657 - 118942 (+)
Type: CAZyme
Location: 116657 - 118942 (+)
Gene ID: Rep_108_c_0_93
Type: TC
Location: 119010 - 122141 (+)
Type: TC
Location: 119010 - 122141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.