Cluster: Rep_108_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_108_c_10 | Rep_108_c_10_29 | 44736 | 45155 | - | 1.A.22.1.1 |
| pfam | Rep_108_c_10 | Rep_108_c_10_30 | 45222 | 46784 | - | DnaB | DnaB_C | ATPase | AAA_25 |
| sulfatase | Rep_108_c_10 | Rep_108_c_10_31 | 46805 | 48595 | - | S1_97 |
| CAZyme | Rep_108_c_10 | Rep_108_c_10_32 | 48946 | 50700 | + | GH123 |
Gene ID: Rep_108_c_10_29
Type: TC
Location: 44736 - 45155 (-)
Type: TC
Location: 44736 - 45155 (-)
Gene ID: Rep_108_c_10_30
Type: pfam
Location: 45222 - 46784 (-)
Type: pfam
Location: 45222 - 46784 (-)
Gene ID: Rep_108_c_10_31
Type: sulfatase
Location: 46805 - 48595 (-)
Type: sulfatase
Location: 46805 - 48595 (-)
Gene ID: Rep_108_c_10_32
Type: CAZyme
Location: 48946 - 50700 (+)
Type: CAZyme
Location: 48946 - 50700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.