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Cluster: Rep_108_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_108_c_6 Rep_108_c_6_48 52219 53553 - GH57
CAZyme Rep_108_c_6 Rep_108_c_6_49 53605 54867 - GT4
CAZyme Rep_108_c_6 Rep_108_c_6_50 54893 56992 - GH133
TC Rep_108_c_6 Rep_108_c_6_51 57459 59159 + 2.A.81.1.2
peptidase Rep_108_c_6 Rep_108_c_6_52 59566 61068 + S01.UPC
pfam Rep_108_c_6 Rep_108_c_6_53 61191 62837 + DUF6377
CAZyme Rep_108_c_6 Rep_108_c_6_54 63127 65253 + GH97
TC Rep_108_c_6 Rep_108_c_6_55 65277 68291 + 1.B.14.6.1
TC Rep_108_c_6 Rep_108_c_6_56 68307 69827 + 8.A.46.1.1
pfam Rep_108_c_6 Rep_108_c_6_57 69824 71011 + SusE | SusF_SusE
CAZyme Rep_108_c_6 Rep_108_c_6_58 71097 72950 + GH13_46
TC Rep_108_c_6 Rep_108_c_6_59 73288 75495 + 2.A.16.2.2
Gene ID: Rep_108_c_6_48
Type: CAZyme
Location: 52219 - 53553 (-)
Gene ID: Rep_108_c_6_49
Type: CAZyme
Location: 53605 - 54867 (-)
Gene ID: Rep_108_c_6_50
Type: CAZyme
Location: 54893 - 56992 (-)
Gene ID: Rep_108_c_6_51
Type: TC
Location: 57459 - 59159 (+)
Gene ID: Rep_108_c_6_52
Type: peptidase
Location: 59566 - 61068 (+)
Gene ID: Rep_108_c_6_53
Type: pfam
Location: 61191 - 62837 (+)
Gene ID: Rep_108_c_6_54
Type: CAZyme
Location: 63127 - 65253 (+)
Gene ID: Rep_108_c_6_55
Type: TC
Location: 65277 - 68291 (+)
Gene ID: Rep_108_c_6_56
Type: TC
Location: 68307 - 69827 (+)
Gene ID: Rep_108_c_6_57
Type: pfam
Location: 69824 - 71011 (+)
Gene ID: Rep_108_c_6_58
Type: CAZyme
Location: 71097 - 72950 (+)
Gene ID: Rep_108_c_6_59
Type: TC
Location: 73288 - 75495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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