Cluster: Rep_108_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_108
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_108_c_0 | Rep_108_c_0_84 | 107255 | 109495 | + | GH89 |
| pfam | Rep_108_c_0 | Rep_108_c_0_85 | 109529 | 109732 | + | TatA_B_E |
| TC | Rep_108_c_0 | Rep_108_c_0_86 | 109710 | 110525 | + | 2.A.64.1.2 |
Gene ID: Rep_108_c_0_84
Type: CAZyme
Location: 107255 - 109495 (+)
Type: CAZyme
Location: 107255 - 109495 (+)
Gene ID: Rep_108_c_0_85
Type: pfam
Location: 109529 - 109732 (+)
Type: pfam
Location: 109529 - 109732 (+)
Gene ID: Rep_108_c_0_86
Type: TC
Location: 109710 - 110525 (+)
Type: TC
Location: 109710 - 110525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A bennonis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.