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Cluster: Rep_1085_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1085_c_11 Rep_1085_c_11_1 1 684 - GT2 | GT2
CAZyme Rep_1085_c_11 Rep_1085_c_11_2 718 1773 - GT10
NULL(UNKNOWN) Rep_1085_c_11 Rep_1085_c_11_3 1824 2210 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_1085_c_11 Rep_1085_c_11_4 2303 2776 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1085_c_11 Rep_1085_c_11_5 2800 3744 - GT2 | GT2
NULL(UNKNOWN) Rep_1085_c_11 Rep_1085_c_11_6 3783 4751 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1085_c_11 Rep_1085_c_11_7 4693 5811 - GNT-I
TC Rep_1085_c_11 Rep_1085_c_11_8 5990 7012 + 2.A.98.1.3
Gene ID: Rep_1085_c_11_1
Type: CAZyme
Location: 1 - 684 (-)
Gene ID: Rep_1085_c_11_2
Type: CAZyme
Location: 718 - 1773 (-)
Gene ID: Rep_1085_c_11_3
Type:
Location: 1824 - 2210 (-)
Gene ID: Rep_1085_c_11_4
Type:
Location: 2303 - 2776 (-)
Gene ID: Rep_1085_c_11_5
Type: CAZyme
Location: 2800 - 3744 (-)
Gene ID: Rep_1085_c_11_6
Type:
Location: 3783 - 4751 (-)
Gene ID: Rep_1085_c_11_7
Type: pfam
Location: 4693 - 5811 (-)
Gene ID: Rep_1085_c_11_8
Type: TC
Location: 5990 - 7012 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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