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PROTEIN: Rep_1085_c_11_6

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Protein File & Metadata
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Source:
Rep_1085_c_11_6.pdb
Genome ID:
Rep_1085
Protein ID:
Rep_1085_c_11_6

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Protein Sequence 
MAAPYLCQNA   ILLLFFNRLD   TTLATLEQIA   KVKPPRLYLA   ADGSRNEQEK   AQIAHLRKEV 60
TGYITWECEI   YTRFLDTNLG   CKMAVSSAIS   WFFSHEKQGI   ILEDDCLPSL   SFFRFCDELL 120
ERYKYEEKIF   MISGWSALDF   AKNTSVETLH   PKAQLQEDYF   FSKYPHIWGW   ASWARSWQKY 180
QLEFSDFETE   FNLLNNFYSK   KEKQYWHKIF   KAYSQGQIDT   WDYPLAYSVW   KHKGLCIYPK 240
NNMITNIGFN   RNDATHTIGE   SKFATMPSYE   LAFPLKHPSA   FKPNTTMDHI   SFGITFTPLS 300
ILARIKRKLH   RYLKVLLSSA   NH 322
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4DMC0-F1-model_v4 7 293 66 367 0.6375 0.7839
AF-Q4D3G6-F1-model_v4 7 293 66 367 0.6371 0.7833
AF-A0A3P7DV18-F1-model_v4 6 287 42 300 0.63 0.7718
AF-A0A3P7Q5X9-F1-model_v4 5 298 33 345 0.6082 0.7051
AF-A0A044SGH9-F1-model_v4 6 310 11 389 0.5871 0.7128
AF-A0A044SYE9-F1-model_v4 7 304 48 397 0.5835 0.7048
AF-K0F8C8-F1-model_v4 6 318 6 271 0.5805 0.6742
AF-Q32EF9-F1-model_v4 7 315 4 279 0.5742 0.664
AF-A0A0K0ETJ8-F1-model_v4 7 310 37 408 0.5708 0.7079
AF-A0A0K0JHB5-F1-model_v4 8 298 76 382 0.5655 0.7101
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QWE08948.1 GT0 4 314 1 302 0.8993 0.9419
AF-A4SVL4-F1-model_v4 GT0 3 311 1 300 0.888 0.9326
AF-F5YQA6-F1-model_v4 GT0 6 317 1 306 0.8756 0.9109
AF-A0A1X9LFJ6-F1-model_v4 GT0 2 305 1 297 0.8719 0.9394
AF-A8YI14-F1-model_v4 GT0 2 305 1 297 0.8717 0.9388
AF-C6W1E6-F1-model_v4 GT0 4 309 1 296 0.8694 0.9328
AF-A1AXF1-F1-model_v4 GT0 1 308 4 305 0.8642 0.9199
AF-B2IZQ8-F1-model_v4 GT0 7 304 1 293 0.8603 0.9326
AF-A0A6P1KTQ9-F1-model_v4 GT0 7 304 1 293 0.8592 0.9315
AF-A0A2L2N2E5-F1-model_v4 GT0 7 301 1 290 0.8584 0.94
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1B1U5H3 GT13 7 308 5 297 0.8014 0.8745
WBV42548.1 GT13 8 297 13 304 0.67 0.7452
R5FYV9 GT2 1 318 68 589 0.6365 0.8404
A0A1N7REQ1 GT2 1 305 1 239 0.6175 0.7636
UBM60722.1 GT2 3 305 1 236 0.6128 0.762
A0A0P0CK37 GT2 1 306 3 242 0.6099 0.7564
I4BX33 GT2 5 321 1 284 0.6095 0.6663
AOC95292.1 GT2 8 314 6 268 0.6074 0.694
C1EGW4 GT13 9 298 1 311 0.6069 0.7027
A0A9E9LT15 GT2 5 313 1 272 0.6065 0.6754
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2apc-assembly1.cif.gz_A 7 298 1 304 0.6092 0.7036
1fo8-assembly1.cif.gz_A 6 298 1 292 0.591 0.6716
5ggi-assembly1.cif.gz_A 2 302 37 394 0.5875 0.7005
5z8b-assembly1.cif.gz_A 8 265 1 209 0.5658 0.7041
8f73-assembly2.cif.gz_D-4 7 266 1 261 0.5205 0.6048
5ggi-assembly2.cif.gz_B 2 302 194 551 0.5164 0.7005
5ggf-assembly1.cif.gz_A 2 299 194 493 0.4926 0.6668
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q11068-F1-model_v4 7 307 91 449 0.5562 0.6991
AF-P47306-F1-model_v4 7 304 1 288 0.5533 0.6123
AF-P26572-F1-model_v4 1 298 74 407 0.552 0.6973
AF-P27115-F1-model_v4 1 298 78 409 0.5493 0.6958
AF-Q09325-F1-model_v4 6 298 105 409 0.5472 0.704
AF-P27808-F1-model_v4 6 298 105 409 0.5468 0.7032
AF-Q9XGM8-F1-model_v4 7 298 104 405 0.5445 0.7009
AF-Q5EAB6-F1-model_v4 2 316 290 660 0.4964 0.685
AF-Q5RCB9-F1-model_v4 2 312 290 659 0.4952 0.692
AF-Q91X88-F1-model_v4 2 311 290 658 0.4945 0.6934
Download Full SwissProt Results