Cluster: Rep_1078_CGC1
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1078_c_0 | Rep_1078_c_0_101 | 94237 | 94902 | - | 3.A.1.122.8 |
| pfam | Rep_1078_c_0 | Rep_1078_c_0_102 | 94903 | 96033 | - | FtsX | MacB_PCD |
| TC | Rep_1078_c_0 | Rep_1078_c_0_103 | 96020 | 97270 | - | 3.A.1.122.8 |
| pfam | Rep_1078_c_0 | Rep_1078_c_0_104 | 97260 | 98678 | - | YHS | FtrD-like |
| TC | Rep_1078_c_0 | Rep_1078_c_0_105 | 98715 | 99239 | - | 2.A.108.2.4 |
| TC | Rep_1078_c_0 | Rep_1078_c_0_106 | 99236 | 101368 | - | 2.A.108.2.4 |
| TC | Rep_1078_c_0 | Rep_1078_c_0_107 | 101473 | 102822 | - | 2.A.22.5.3 |
| pfam | Rep_1078_c_0 | Rep_1078_c_0_108 | 102905 | 103660 | - | Exo_endo_phos |
| TC | Rep_1078_c_0 | Rep_1078_c_0_109 | 103786 | 105348 | + | 2.A.20.2.4 |
| NULL(UNKNOWN) | Rep_1078_c_0 | Rep_1078_c_0_110 | 105423 | 106235 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1078_c_0 | Rep_1078_c_0_111 | 107212 | 109458 | - | 1.B.33.1.1 |
| pfam | Rep_1078_c_0 | Rep_1078_c_0_112 | 109536 | 110366 | + | PDH_N | F420_oxidored | PDH_C |
| STP | Rep_1078_c_0 | Rep_1078_c_0_113 | 110454 | 111833 | + | Peptidase_M23 |
| CAZyme | Rep_1078_c_0 | Rep_1078_c_0_114 | 111895 | 112785 | + | CE11 |
Gene ID: Rep_1078_c_0_101
Type: TC
Location: 94237 - 94902 (-)
Type: TC
Location: 94237 - 94902 (-)
Gene ID: Rep_1078_c_0_102
Type: pfam
Location: 94903 - 96033 (-)
Type: pfam
Location: 94903 - 96033 (-)
Gene ID: Rep_1078_c_0_103
Type: TC
Location: 96020 - 97270 (-)
Type: TC
Location: 96020 - 97270 (-)
Gene ID: Rep_1078_c_0_104
Type: pfam
Location: 97260 - 98678 (-)
Type: pfam
Location: 97260 - 98678 (-)
Gene ID: Rep_1078_c_0_105
Type: TC
Location: 98715 - 99239 (-)
Type: TC
Location: 98715 - 99239 (-)
Gene ID: Rep_1078_c_0_106
Type: TC
Location: 99236 - 101368 (-)
Type: TC
Location: 99236 - 101368 (-)
Gene ID: Rep_1078_c_0_107
Type: TC
Location: 101473 - 102822 (-)
Type: TC
Location: 101473 - 102822 (-)
Gene ID: Rep_1078_c_0_108
Type: pfam
Location: 102905 - 103660 (-)
Type: pfam
Location: 102905 - 103660 (-)
Gene ID: Rep_1078_c_0_109
Type: TC
Location: 103786 - 105348 (+)
Type: TC
Location: 103786 - 105348 (+)
Gene ID: Rep_1078_c_0_110
Type:
Location: 105423 - 106235 (+)
Type:
Location: 105423 - 106235 (+)
Gene ID: Rep_1078_c_0_111
Type: TC
Location: 107212 - 109458 (-)
Type: TC
Location: 107212 - 109458 (-)
Gene ID: Rep_1078_c_0_112
Type: pfam
Location: 109536 - 110366 (+)
Type: pfam
Location: 109536 - 110366 (+)
Gene ID: Rep_1078_c_0_113
Type: STP
Location: 110454 - 111833 (+)
Type: STP
Location: 110454 - 111833 (+)
Gene ID: Rep_1078_c_0_114
Type: CAZyme
Location: 111895 - 112785 (+)
Type: CAZyme
Location: 111895 - 112785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B ureolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.