PROTEIN: Rep_1078_c_0_110
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Protein File & Metadata
Source:
Rep_1078_c_0_110.pdb
Genome ID:
Protein ID:
Rep_1078_c_0_110
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Protein Sequence
MKKILLTLIS AFLVFTTFSF ASETENKTLK VHPFTGALGS VSNILEFDNF LILIDPQETY 60 KSTKALNSYI KTLDKPLKAV ILATHPIADN SYDGLKIYGF EALDEFVKSG KISFFIDLFE 120 QSAGEDMIKS AITSTNLLKD GENEIEGIKV DIKTNKEGFP PEIDIDFKDF GVYFTHLAAN 180 DSHLLIHSKD EVKSLLKKWK KLRKYSLVLS SHLLPIDQNG VEFTISYLEK TKEILNVAKN 240 KDEFVNLMKE AYPNANMETF LYMSADSIFK 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GY67-F1-model_v4 | 25 | 270 | 18 | 279 | 0.7322 |
0.8423 |
| AF-Q9I775-F1-model_v4 | 26 | 270 | 28 | 290 | 0.7251 |
0.8513 |
| AF-A0A0D2GEF0-F1-model_v4 | 25 | 270 | 1 | 285 | 0.7125 |
0.8336 |
| AF-A0A1C1CB94-F1-model_v4 | 13 | 270 | 16 | 312 | 0.6914 |
0.806 |
| AF-X8F922-F1-model_v4 | 14 | 240 | 2 | 242 | 0.6749 |
0.7833 |
| AF-Q2FY29-F1-model_v4 | 29 | 235 | 1 | 207 | 0.6744 |
0.7853 |
| AF-Q8ZQB3-F1-model_v4 | 29 | 247 | 1 | 215 | 0.671 |
0.77 |
| AF-A0A133CHT3-F1-model_v4 | 29 | 231 | 1 | 208 | 0.6705 |
0.7973 |
| AF-Q32E48-F1-model_v4 | 29 | 247 | 1 | 215 | 0.6704 |
0.7693 |
| AF-P75849-F1-model_v4 | 29 | 247 | 1 | 215 | 0.67 |
0.769 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3fai-assembly1.cif.gz_A | 14 | 268 | 1 | 227 | 0.6945 |
0.7815 |
| 3f9o-assembly1.cif.gz_A | 14 | 267 | 1 | 226 | 0.6935 |
0.7817 |
| 3sd9-assembly2.cif.gz_B | 13 | 265 | 1 | 229 | 0.6909 |
0.7735 |
| 8d2z-assembly2.cif.gz_B | 14 | 270 | 1 | 280 | 0.6905 |
0.7917 |
| 7l0b-assembly1.cif.gz_A | 28 | 235 | 1 | 202 | 0.6724 |
0.7903 |
| 4bp0-assembly1.cif.gz_A | 12 | 270 | 7 | 246 | 0.6717 |
0.7463 |
| 8dq1-assembly1.cif.gz_A | 15 | 270 | 5 | 295 | 0.6706 |
0.766 |
| 7l0b-assembly3.cif.gz_C | 28 | 232 | 1 | 200 | 0.6706 |
0.7913 |
| 5ls3-assembly1.cif.gz_B | 12 | 269 | 7 | 245 | 0.6703 |
0.7463 |
| 7ev5-assembly1.cif.gz_A | 30 | 232 | 1 | 209 | 0.6689 |
0.7968 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P54501-F1-model_v4 | 29 | 247 | 1 | 211 | 0.6754 |
0.7807 |
| AF-A0A096ZED0-F1-model_v4 | 10 | 270 | 14 | 276 | 0.6729 |
0.7709 |
| AF-P75849-F1-model_v4 | 29 | 247 | 1 | 215 | 0.67 |
0.769 |
| AF-P26918-F1-model_v4 | 12 | 268 | 26 | 254 | 0.6636 |
0.7786 |
| AF-Q57544-F1-model_v4 | 29 | 236 | 1 | 212 | 0.6602 |
0.777 |
| AF-O67893-F1-model_v4 | 29 | 236 | 1 | 211 | 0.6577 |
0.7711 |
| AF-Q5XD24-F1-model_v4 | 25 | 233 | 18 | 232 | 0.6559 |
0.7991 |
| AF-O34910-F1-model_v4 | 15 | 268 | 1 | 233 | 0.6487 |
0.7173 |
| AF-Q970L2-F1-model_v4 | 28 | 270 | 4 | 260 | 0.644 |
0.7282 |
| AF-P9WMW2-F1-model_v4 | 29 | 233 | 1 | 221 | 0.6354 |
0.777 |