Cluster: Rep_102_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_102
- CGC Family ID: CGCFAM_03958
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_102_c_30 | Rep_102_c_30_14 | 14507 | 15637 | - | CBM50 |
| peptidase | Rep_102_c_30 | Rep_102_c_30_15 | 15905 | 17101 | - | C01.UPA |
| NULL(UNKNOWN) | Rep_102_c_30 | Rep_102_c_30_16 | 17515 | 18633 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_102_c_30 | Rep_102_c_30_17 | 18773 | 20113 | - | 3.A.5.1.1 |
| pfam | Rep_102_c_30 | Rep_102_c_30_18 | 20135 | 20482 | - | Asp_decarbox |
| NULL(UNKNOWN) | Rep_102_c_30 | Rep_102_c_30_19 | 20509 | 21198 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_102_c_30 | Rep_102_c_30_20 | 21211 | 23973 | - | 3.A.12.1.1 |
Gene ID: Rep_102_c_30_14
Type: CAZyme
Location: 14507 - 15637 (-)
Type: CAZyme
Location: 14507 - 15637 (-)
Gene ID: Rep_102_c_30_15
Type: peptidase
Location: 15905 - 17101 (-)
Type: peptidase
Location: 15905 - 17101 (-)
Gene ID: Rep_102_c_30_16
Type:
Location: 17515 - 18633 (-)
Type:
Location: 17515 - 18633 (-)
Gene ID: Rep_102_c_30_17
Type: TC
Location: 18773 - 20113 (-)
Type: TC
Location: 18773 - 20113 (-)
Gene ID: Rep_102_c_30_18
Type: pfam
Location: 20135 - 20482 (-)
Type: pfam
Location: 20135 - 20482 (-)
Gene ID: Rep_102_c_30_19
Type:
Location: 20509 - 21198 (-)
Type:
Location: 20509 - 21198 (-)
Gene ID: Rep_102_c_30_20
Type: TC
Location: 21211 - 23973 (-)
Type: TC
Location: 21211 - 23973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Species
Porphyromonas asaccharolytica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.