PROTEIN: Rep_102_c_30_19
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Protein File & Metadata
Source:
Rep_102_c_30_19.pdb
Genome ID:
Protein ID:
Rep_102_c_30_19
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Protein Sequence
MRPNHSLSYQ RYSVRFATHL LGSLLALFLC GTFAIAPLHG QRKAVFDLNK ALQQFEQQVK 60 KGVAITFTLT SQGSKPQEGY TWLYGRRFML SMPGMEVAFD GSTLRIINQS ERTYTLMTPS 120 EQDLTAMNPL AYIQKTSQRY RITERRSPRG TVIYRFVPTQ GTNVLAGVKY YEVTFDQQSQ 180 APKRVDLYFD LGEQVSYTIH KIQPKEHITS QSFTFAPQEY KSLEVVDLR 229
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32E10-F1-model_v4 | 24 | 229 | 8 | 203 | 0.7342 |
0.8296 |
| AF-P61316-F1-model_v4 | 24 | 229 | 7 | 202 | 0.7339 |
0.8277 |
| AF-A0A077ZKH5-F1-model_v4 | 22 | 229 | 6 | 203 | 0.731 |
0.8193 |
| AF-Q8ZQD4-F1-model_v4 | 25 | 229 | 8 | 202 | 0.7302 |
0.8267 |
| AF-A0A0H3GKZ2-F1-model_v4 | 24 | 229 | 7 | 202 | 0.7258 |
0.8195 |
| AF-Q5FA29-F1-model_v4 | 43 | 229 | 23 | 207 | 0.6874 |
0.8254 |
| AF-Q9I0M4-F1-model_v4 | 34 | 229 | 16 | 208 | 0.6663 |
0.774 |
| AF-P45263-F1-model_v4 | 28 | 229 | 11 | 203 | 0.655 |
0.7603 |
| AF-O25474-F1-model_v4 | 39 | 228 | 20 | 184 | 0.6317 |
0.7967 |
| AF-Q9PNZ0-F1-model_v4 | 46 | 227 | 15 | 169 | 0.6304 |
0.8072 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H1PQ39 | GT2 | 37 | 216 | 278 | 463 | 0.437 |
0.7317 |
| A0A1P8WH16 | CE12 , GH43_5 , PL22 | 32 | 226 | 26 | 462 | 0.3239 |
0.6324 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8cgm-assembly2.cif.gz_B | 38 | 229 | 1 | 190 | 0.7673 |
0.8609 |
| 4mxt-assembly1.cif.gz_A-2 | 40 | 229 | 2 | 187 | 0.7469 |
0.8509 |
| 4ki3-assembly4.cif.gz_J | 42 | 229 | 1 | 177 | 0.7321 |
0.8448 |
| 4ki3-assembly3.cif.gz_I | 42 | 229 | 1 | 180 | 0.7308 |
0.8385 |
| 4ki3-assembly1.cif.gz_D | 42 | 229 | 1 | 179 | 0.7304 |
0.8398 |
| 4ki3-assembly4.cif.gz_L | 42 | 229 | 1 | 176 | 0.7301 |
0.8445 |
| 4ki3-assembly3.cif.gz_G | 42 | 229 | 1 | 179 | 0.7262 |
0.8355 |
| 4ki3-assembly4.cif.gz_K | 42 | 229 | 1 | 171 | 0.7198 |
0.8424 |
| 3ksn-assembly1.cif.gz_A | 42 | 229 | 1 | 176 | 0.7197 |
0.8388 |
| 4ki3-assembly2.cif.gz_E | 42 | 229 | 1 | 169 | 0.7162 |
0.8425 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0VQ09-F1-model_v4 | 20 | 229 | 7 | 208 | 0.7464 |
0.8293 |
| AF-Q66CK1-F1-model_v4 | 21 | 229 | 4 | 202 | 0.7442 |
0.8264 |
| AF-Q5NEJ3-F1-model_v4 | 25 | 229 | 6 | 202 | 0.7439 |
0.8362 |
| AF-Q8ZGC6-F1-model_v4 | 21 | 229 | 5 | 202 | 0.7439 |
0.8295 |
| AF-A1JMF6-F1-model_v4 | 22 | 229 | 4 | 202 | 0.7431 |
0.8267 |
| AF-Q1CA87-F1-model_v4 | 21 | 229 | 5 | 202 | 0.7431 |
0.8288 |
| AF-A9R5V0-F1-model_v4 | 21 | 229 | 4 | 202 | 0.7429 |
0.8251 |
| AF-A4TN31-F1-model_v4 | 21 | 229 | 4 | 202 | 0.7428 |
0.8251 |
| AF-B2KA09-F1-model_v4 | 21 | 229 | 5 | 202 | 0.7427 |
0.8284 |
| AF-Q1CGE9-F1-model_v4 | 21 | 229 | 4 | 202 | 0.7414 |
0.8234 |