dbCAN Logo

Cluster: Rep_1022_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1022_c_1 Rep_1022_c_1_310 352755 354413 + GH13_31
CAZyme Rep_1022_c_1 Rep_1022_c_1_311 354424 356148 + CBM34 | GH13_20
CAZyme Rep_1022_c_1 Rep_1022_c_1_312 356302 358572 + GH65
pfam Rep_1022_c_1 Rep_1022_c_1_313 358557 359219 + Hydrolase | HAD_2
TC Rep_1022_c_1 Rep_1022_c_1_314 359240 360343 + 3.A.1.1.20
TC Rep_1022_c_1 Rep_1022_c_1_315 360454 361671 + 3.A.1.1.27
TC Rep_1022_c_1 Rep_1022_c_1_316 361708 363063 + 3.A.1.1.27
TC Rep_1022_c_1 Rep_1022_c_1_317 363066 363923 + 3.A.1.1.27
CAZyme Rep_1022_c_1 Rep_1022_c_1_318 363995 365611 + GH13_31
Gene ID: Rep_1022_c_1_310
Type: CAZyme
Location: 352755 - 354413 (+)
Gene ID: Rep_1022_c_1_311
Type: CAZyme
Location: 354424 - 356148 (+)
Gene ID: Rep_1022_c_1_312
Type: CAZyme
Location: 356302 - 358572 (+)
Gene ID: Rep_1022_c_1_313
Type: pfam
Location: 358557 - 359219 (+)
Gene ID: Rep_1022_c_1_314
Type: TC
Location: 359240 - 360343 (+)
Gene ID: Rep_1022_c_1_315
Type: TC
Location: 360454 - 361671 (+)
Gene ID: Rep_1022_c_1_316
Type: TC
Location: 361708 - 363063 (+)
Gene ID: Rep_1022_c_1_317
Type: TC
Location: 363066 - 363923 (+)
Gene ID: Rep_1022_c_1_318
Type: CAZyme
Location: 363995 - 365611 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List