dbCAN Logo

Cluster: Rep_1021_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1021_c_1 Rep_1021_c_1_80 77956 79512 - 2.A.36.3.2
TC Rep_1021_c_1 Rep_1021_c_1_81 79617 80723 + 9.B.141.1.3
TC Rep_1021_c_1 Rep_1021_c_1_82 80720 81490 + 9.B.141.1.2
peptidase Rep_1021_c_1 Rep_1021_c_1_83 81503 82321 + S09.UPW
CAZyme Rep_1021_c_1 Rep_1021_c_1_84 82404 85463 - GH31_18
TF Rep_1021_c_1 Rep_1021_c_1_85 85623 86339 + GntR
STP Rep_1021_c_1 Rep_1021_c_1_86 86360 87526 + SIS | SIS
CAZyme Rep_1021_c_1 Rep_1021_c_1_87 87588 88745 + CE9
TC Rep_1021_c_1 Rep_1021_c_1_88 88884 89372 + 4.A.6.1.18
TC Rep_1021_c_1 Rep_1021_c_1_89 89384 90301 + 4.A.6.1.18
TC Rep_1021_c_1 Rep_1021_c_1_90 90288 91106 + 4.A.6.1.18
TC Rep_1021_c_1 Rep_1021_c_1_91 91130 91528 + 4.A.6.1.18
pfam Rep_1021_c_1 Rep_1021_c_1_92 91684 92880 + Zn_Ribbon_1 | DUF4767
pfam Rep_1021_c_1 Rep_1021_c_1_93 92926 93402 - Nuc_deoxyrib_tr
TC Rep_1021_c_1 Rep_1021_c_1_94 93488 94048 + 4.A.5.1.2
Gene ID: Rep_1021_c_1_80
Type: TC
Location: 77956 - 79512 (-)
Gene ID: Rep_1021_c_1_81
Type: TC
Location: 79617 - 80723 (+)
Gene ID: Rep_1021_c_1_82
Type: TC
Location: 80720 - 81490 (+)
Gene ID: Rep_1021_c_1_83
Type: peptidase
Location: 81503 - 82321 (+)
Gene ID: Rep_1021_c_1_84
Type: CAZyme
Location: 82404 - 85463 (-)
Gene ID: Rep_1021_c_1_85
Type: TF
Location: 85623 - 86339 (+)
Gene ID: Rep_1021_c_1_86
Type: STP
Location: 86360 - 87526 (+)
Gene ID: Rep_1021_c_1_87
Type: CAZyme
Location: 87588 - 88745 (+)
Gene ID: Rep_1021_c_1_88
Type: TC
Location: 88884 - 89372 (+)
Gene ID: Rep_1021_c_1_89
Type: TC
Location: 89384 - 90301 (+)
Gene ID: Rep_1021_c_1_90
Type: TC
Location: 90288 - 91106 (+)
Gene ID: Rep_1021_c_1_91
Type: TC
Location: 91130 - 91528 (+)
Gene ID: Rep_1021_c_1_92
Type: pfam
Location: 91684 - 92880 (+)
Gene ID: Rep_1021_c_1_93
Type: pfam
Location: 92926 - 93402 (-)
Gene ID: Rep_1021_c_1_94
Type: TC
Location: 93488 - 94048 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List