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Cluster: Rep_1021_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1021_c_1 Rep_1021_c_1_22 23459 24814 - 2.A.1.23.2
TC Rep_1021_c_1 Rep_1021_c_1_23 24838 26196 - 2.A.1.23.1
pfam Rep_1021_c_1 Rep_1021_c_1_24 26446 27306 - Acyltransferase
CAZyme Rep_1021_c_1 Rep_1021_c_1_25 27522 28253 - GT8
CAZyme Rep_1021_c_1 Rep_1021_c_1_26 28266 29216 - GT8
CAZyme Rep_1021_c_1 Rep_1021_c_1_27 29244 30068 - GT8
pfam Rep_1021_c_1 Rep_1021_c_1_28 30070 30846 - Acyltransferase
TF Rep_1021_c_1 Rep_1021_c_1_29 31321 32028 + Trans_reg_C
TC Rep_1021_c_1 Rep_1021_c_1_30 32133 33926 + 2.A.21.9.1
Gene ID: Rep_1021_c_1_22
Type: TC
Location: 23459 - 24814 (-)
Gene ID: Rep_1021_c_1_23
Type: TC
Location: 24838 - 26196 (-)
Gene ID: Rep_1021_c_1_24
Type: pfam
Location: 26446 - 27306 (-)
Gene ID: Rep_1021_c_1_25
Type: CAZyme
Location: 27522 - 28253 (-)
Gene ID: Rep_1021_c_1_26
Type: CAZyme
Location: 28266 - 29216 (-)
Gene ID: Rep_1021_c_1_27
Type: CAZyme
Location: 29244 - 30068 (-)
Gene ID: Rep_1021_c_1_28
Type: pfam
Location: 30070 - 30846 (-)
Gene ID: Rep_1021_c_1_29
Type: TF
Location: 31321 - 32028 (+)
Gene ID: Rep_1021_c_1_30
Type: TC
Location: 32133 - 33926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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