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Cluster: Rep_1021_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1021_c_18 Rep_1021_c_18_3 3243 3947 - 3.A.1.124.6
TC Rep_1021_c_18 Rep_1021_c_18_4 4307 5683 + 2.A.35.1.3
pfam Rep_1021_c_18 Rep_1021_c_18_5 5808 6653 + SAM_HAT_N | SAM_HAT_C
TC Rep_1021_c_18 Rep_1021_c_18_6 6674 7231 + 3.A.1.29.1
TC Rep_1021_c_18 Rep_1021_c_18_7 7253 8974 + 3.A.1.29.1
TC Rep_1021_c_18 Rep_1021_c_18_8 8967 9797 + 3.A.1.29.1
TC Rep_1021_c_18 Rep_1021_c_18_9 9860 10579 + 1.A.14.2.6
CAZyme Rep_1021_c_18 Rep_1021_c_18_10 10782 11444 - GT101
Gene ID: Rep_1021_c_18_3
Type: TC
Location: 3243 - 3947 (-)
Gene ID: Rep_1021_c_18_4
Type: TC
Location: 4307 - 5683 (+)
Gene ID: Rep_1021_c_18_5
Type: pfam
Location: 5808 - 6653 (+)
Gene ID: Rep_1021_c_18_6
Type: TC
Location: 6674 - 7231 (+)
Gene ID: Rep_1021_c_18_7
Type: TC
Location: 7253 - 8974 (+)
Gene ID: Rep_1021_c_18_8
Type: TC
Location: 8967 - 9797 (+)
Gene ID: Rep_1021_c_18_9
Type: TC
Location: 9860 - 10579 (+)
Gene ID: Rep_1021_c_18_10
Type: CAZyme
Location: 10782 - 11444 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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