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Cluster: Rep_1021_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1021_c_15 Rep_1021_c_15_13 8695 9552 - GT2
CAZyme Rep_1021_c_15 Rep_1021_c_15_14 9570 10343 - GT111
CAZyme Rep_1021_c_15 Rep_1021_c_15_15 10336 11082 - GT32
NULL(UNKNOWN) Rep_1021_c_15 Rep_1021_c_15_16 11107 12276 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1021_c_15 Rep_1021_c_15_17 12305 13279 - GT2
CAZyme Rep_1021_c_15 Rep_1021_c_15_18 13293 14120 - GT2
CAZyme Rep_1021_c_15 Rep_1021_c_15_19 14145 14573 - GT4
NULL(UNKNOWN) Rep_1021_c_15 Rep_1021_c_15_20 14573 14752 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1021_c_15 Rep_1021_c_15_21 14802 15893 - GT4
TC Rep_1021_c_15 Rep_1021_c_15_22 15897 16556 - 9.B.18.1.2
pfam Rep_1021_c_15 Rep_1021_c_15_23 16581 17351 - CpsB_CapC
TC Rep_1021_c_15 Rep_1021_c_15_24 17358 18119 - 8.A.3.3.2
Gene ID: Rep_1021_c_15_13
Type: CAZyme
Location: 8695 - 9552 (-)
Gene ID: Rep_1021_c_15_14
Type: CAZyme
Location: 9570 - 10343 (-)
Gene ID: Rep_1021_c_15_15
Type: CAZyme
Location: 10336 - 11082 (-)
Gene ID: Rep_1021_c_15_16
Type:
Location: 11107 - 12276 (-)
Gene ID: Rep_1021_c_15_17
Type: CAZyme
Location: 12305 - 13279 (-)
Gene ID: Rep_1021_c_15_18
Type: CAZyme
Location: 13293 - 14120 (-)
Gene ID: Rep_1021_c_15_19
Type: CAZyme
Location: 14145 - 14573 (-)
Gene ID: Rep_1021_c_15_20
Type:
Location: 14573 - 14752 (-)
Gene ID: Rep_1021_c_15_21
Type: CAZyme
Location: 14802 - 15893 (-)
Gene ID: Rep_1021_c_15_22
Type: TC
Location: 15897 - 16556 (-)
Gene ID: Rep_1021_c_15_23
Type: pfam
Location: 16581 - 17351 (-)
Gene ID: Rep_1021_c_15_24
Type: TC
Location: 17358 - 18119 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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