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Cluster: Rep_1021_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1021_c_11 Rep_1021_c_11_26 27769 28509 + GT26
CAZyme Rep_1021_c_11 Rep_1021_c_11_27 28514 29629 + GT4
CAZyme Rep_1021_c_11 Rep_1021_c_11_28 29613 31607 + GT2
pfam Rep_1021_c_11 Rep_1021_c_11_29 31717 33189 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam Rep_1021_c_11 Rep_1021_c_11_30 33191 34024 + NAD_synthase
TC Rep_1021_c_11 Rep_1021_c_11_31 35072 35683 + 3.A.24.1.1
pfam Rep_1021_c_11 Rep_1021_c_11_32 35715 35957 + AAA_lid_6
TC Rep_1021_c_11 Rep_1021_c_11_33 36181 38856 + 3.A.3.2.28
pfam Rep_1021_c_11 Rep_1021_c_11_34 38982 40130 + Glyphos_transf
TC Rep_1021_c_11 Rep_1021_c_11_35 40142 41584 + 2.A.66.2.16
CAZyme Rep_1021_c_11 Rep_1021_c_11_36 41581 42282 + GT32
pfam Rep_1021_c_11 Rep_1021_c_11_37 42282 42740 + SprT-like | Zn_ribbon_SprT
TC Rep_1021_c_11 Rep_1021_c_11_38 42958 43575 + 2.A.87.2.1
CAZyme Rep_1021_c_11 Rep_1021_c_11_39 43577 44203 + GH73
Gene ID: Rep_1021_c_11_26
Type: CAZyme
Location: 27769 - 28509 (+)
Gene ID: Rep_1021_c_11_27
Type: CAZyme
Location: 28514 - 29629 (+)
Gene ID: Rep_1021_c_11_28
Type: CAZyme
Location: 29613 - 31607 (+)
Gene ID: Rep_1021_c_11_29
Type: pfam
Location: 31717 - 33189 (+)
Gene ID: Rep_1021_c_11_30
Type: pfam
Location: 33191 - 34024 (+)
Gene ID: Rep_1021_c_11_31
Type: TC
Location: 35072 - 35683 (+)
Gene ID: Rep_1021_c_11_32
Type: pfam
Location: 35715 - 35957 (+)
Gene ID: Rep_1021_c_11_33
Type: TC
Location: 36181 - 38856 (+)
Gene ID: Rep_1021_c_11_34
Type: pfam
Location: 38982 - 40130 (+)
Gene ID: Rep_1021_c_11_35
Type: TC
Location: 40142 - 41584 (+)
Gene ID: Rep_1021_c_11_36
Type: CAZyme
Location: 41581 - 42282 (+)
Gene ID: Rep_1021_c_11_37
Type: pfam
Location: 42282 - 42740 (+)
Gene ID: Rep_1021_c_11_38
Type: TC
Location: 42958 - 43575 (+)
Gene ID: Rep_1021_c_11_39
Type: CAZyme
Location: 43577 - 44203 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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