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Cluster: Rep_1021_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1021_c_5 Rep_1021_c_5_74 73891 75105 + 2.A.1.2.20
peptidase Rep_1021_c_5 Rep_1021_c_5_75 75128 75811 + C26.UNW
TC Rep_1021_c_5 Rep_1021_c_5_76 75853 77463 - 3.A.1.21.2
pfam Rep_1021_c_5 Rep_1021_c_5_77 77483 77989 - Macro
TC Rep_1021_c_5 Rep_1021_c_5_78 78168 79757 + 3.A.1.111.1
TC Rep_1021_c_5 Rep_1021_c_5_79 79764 81344 + 3.A.1.112.3
TC Rep_1021_c_5 Rep_1021_c_5_80 81417 83360 - 4.A.1.2.12
CAZyme Rep_1021_c_5 Rep_1021_c_5_81 83596 85065 + GH32
Gene ID: Rep_1021_c_5_74
Type: TC
Location: 73891 - 75105 (+)
Gene ID: Rep_1021_c_5_75
Type: peptidase
Location: 75128 - 75811 (+)
Gene ID: Rep_1021_c_5_76
Type: TC
Location: 75853 - 77463 (-)
Gene ID: Rep_1021_c_5_77
Type: pfam
Location: 77483 - 77989 (-)
Gene ID: Rep_1021_c_5_78
Type: TC
Location: 78168 - 79757 (+)
Gene ID: Rep_1021_c_5_79
Type: TC
Location: 79764 - 81344 (+)
Gene ID: Rep_1021_c_5_80
Type: TC
Location: 81417 - 83360 (-)
Gene ID: Rep_1021_c_5_81
Type: CAZyme
Location: 83596 - 85065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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