Cluster: Rep_1021_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1021
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1021_c_5 | Rep_1021_c_5_55 | 55803 | 57281 | - | GH1 |
| TC | Rep_1021_c_5 | Rep_1021_c_5_56 | 57291 | 59153 | - | 4.A.1.2.11 |
| pfam | Rep_1021_c_5 | Rep_1021_c_5_57 | 59156 | 59998 | - | PRD | PRD | CAT_RBD |
| TC | Rep_1021_c_5 | Rep_1021_c_5_58 | 60141 | 60821 | - | 3.A.1.122.14 |
Gene ID: Rep_1021_c_5_55
Type: CAZyme
Location: 55803 - 57281 (-)
Type: CAZyme
Location: 55803 - 57281 (-)
Gene ID: Rep_1021_c_5_56
Type: TC
Location: 57291 - 59153 (-)
Type: TC
Location: 57291 - 59153 (-)
Gene ID: Rep_1021_c_5_57
Type: pfam
Location: 59156 - 59998 (-)
Type: pfam
Location: 59156 - 59998 (-)
Gene ID: Rep_1021_c_5_58
Type: TC
Location: 60141 - 60821 (-)
Type: TC
Location: 60141 - 60821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.