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Cluster: Rep_1001_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1001_c_7 Rep_1001_c_7_196 218993 220063 - 2.A.86.1.1
CAZyme Rep_1001_c_7 Rep_1001_c_7_197 220306 222261 - GH127
TC Rep_1001_c_7 Rep_1001_c_7_198 222272 223672 - 2.A.2.3.4
TF Rep_1001_c_7 Rep_1001_c_7_199 223921 224739 + HTH_AraC
TC Rep_1001_c_7 Rep_1001_c_7_200 224792 226372 - 9.B.34.1.3
pfam Rep_1001_c_7 Rep_1001_c_7_201 226528 227358 - Metallophos | Metallophos_2
TC Rep_1001_c_7 Rep_1001_c_7_202 227370 228356 - 3.A.1.20.2
TC Rep_1001_c_7 Rep_1001_c_7_203 228353 229168 - 3.A.1.6.3
TC Rep_1001_c_7 Rep_1001_c_7_204 229165 230046 - 3.A.1.6.7
Gene ID: Rep_1001_c_7_196
Type: TC
Location: 218993 - 220063 (-)
Gene ID: Rep_1001_c_7_197
Type: CAZyme
Location: 220306 - 222261 (-)
Gene ID: Rep_1001_c_7_198
Type: TC
Location: 222272 - 223672 (-)
Gene ID: Rep_1001_c_7_199
Type: TF
Location: 223921 - 224739 (+)
Gene ID: Rep_1001_c_7_200
Type: TC
Location: 224792 - 226372 (-)
Gene ID: Rep_1001_c_7_201
Type: pfam
Location: 226528 - 227358 (-)
Gene ID: Rep_1001_c_7_202
Type: TC
Location: 227370 - 228356 (-)
Gene ID: Rep_1001_c_7_203
Type: TC
Location: 228353 - 229168 (-)
Gene ID: Rep_1001_c_7_204
Type: TC
Location: 229165 - 230046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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