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Cluster: Rep_1001_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1001_c_33 Rep_1001_c_33_104 121469 124555 + GH2
TC Rep_1001_c_33 Rep_1001_c_33_105 124605 125849 + 2.A.1.5.1
TC Rep_1001_c_33 Rep_1001_c_33_106 126100 127617 + 1.B.3.1.2
TC Rep_1001_c_33 Rep_1001_c_33_107 127684 129054 + 4.A.1.2.1
CAZyme Rep_1001_c_33 Rep_1001_c_33_108 129054 130463 + GH32
TF Rep_1001_c_33 Rep_1001_c_33_109 130493 131509 + LacI
pfam Rep_1001_c_33 Rep_1001_c_33_110 131516 132268 - DsbC_N | Thioredoxin_2 | Thioredoxin_4
TC Rep_1001_c_33 Rep_1001_c_33_111 132282 132716 - 9.B.102.5.5
TC Rep_1001_c_33 Rep_1001_c_33_112 132732 133157 - 9.B.102.5.2
pfam Rep_1001_c_33 Rep_1001_c_33_113 133194 134477 - Lactamase_B | BLH_phosphatase
TC Rep_1001_c_33 Rep_1001_c_33_114 134495 135286 - 2.A.102.4.11
Gene ID: Rep_1001_c_33_104
Type: CAZyme
Location: 121469 - 124555 (+)
Gene ID: Rep_1001_c_33_105
Type: TC
Location: 124605 - 125849 (+)
Gene ID: Rep_1001_c_33_106
Type: TC
Location: 126100 - 127617 (+)
Gene ID: Rep_1001_c_33_107
Type: TC
Location: 127684 - 129054 (+)
Gene ID: Rep_1001_c_33_108
Type: CAZyme
Location: 129054 - 130463 (+)
Gene ID: Rep_1001_c_33_109
Type: TF
Location: 130493 - 131509 (+)
Gene ID: Rep_1001_c_33_110
Type: pfam
Location: 131516 - 132268 (-)
Gene ID: Rep_1001_c_33_111
Type: TC
Location: 132282 - 132716 (-)
Gene ID: Rep_1001_c_33_112
Type: TC
Location: 132732 - 133157 (-)
Gene ID: Rep_1001_c_33_113
Type: pfam
Location: 133194 - 134477 (-)
Gene ID: Rep_1001_c_33_114
Type: TC
Location: 134495 - 135286 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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