Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00224
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_109 | 116613 | 118484 | + | CE20 | CE20 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_110 | 118524 | 120062 | + | CBM91 | GH43_10 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_111 | 120136 | 120954 | + | CE1 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_112 | 121158 | 124874 | + | CBM22 | CBM22 | CBM9 | GH10 |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_113 | 124908 | 125117 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_114 | 125229 | 126554 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_115 | 126794 | 128476 | + | 3.A.1.1.29 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_116 | 128529 | 129506 | + | 3.A.1.1.29 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_117 | 129525 | 130418 | + | 3.A.1.1.29 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_118 | 130418 | 131539 | + | GH8 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_119 | 131639 | 133183 | + | CBM91 | GH43_12 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_960 | RavehSadkaT_2016_SRR6257474_bin.5_k119_960_120 | 133267 | 135021 | + | 8.A.59.2.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_109
Type: CAZyme
Location: 116613 - 118484 (+)
Type: CAZyme
Location: 116613 - 118484 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_110
Type: CAZyme
Location: 118524 - 120062 (+)
Type: CAZyme
Location: 118524 - 120062 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_111
Type: CAZyme
Location: 120136 - 120954 (+)
Type: CAZyme
Location: 120136 - 120954 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_112
Type: CAZyme
Location: 121158 - 124874 (+)
Type: CAZyme
Location: 121158 - 124874 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_113
Type:
Location: 124908 - 125117 (+)
Type:
Location: 124908 - 125117 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_114
Type:
Location: 125229 - 126554 (+)
Type:
Location: 125229 - 126554 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_115
Type: TC
Location: 126794 - 128476 (+)
Type: TC
Location: 126794 - 128476 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_116
Type: TC
Location: 128529 - 129506 (+)
Type: TC
Location: 128529 - 129506 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_117
Type: TC
Location: 129525 - 130418 (+)
Type: TC
Location: 129525 - 130418 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_118
Type: CAZyme
Location: 130418 - 131539 (+)
Type: CAZyme
Location: 130418 - 131539 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_119
Type: CAZyme
Location: 131639 - 133183 (+)
Type: CAZyme
Location: 131639 - 133183 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_120
Type: TC
Location: 133267 - 135021 (+)
Type: TC
Location: 133267 - 135021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.